STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_13056Tripartite motif-containing protein 29. (144 aa)    
Predicted Functional Partners:
N300_12748
Putative ATP-dependent RNA helicase DDX58.
   
 0.835
N300_03535
Polyubiquitin.
    
 0.712
N300_06258
Ubiquitin-40S ribosomal protein S27a.
    
  0.695
N300_08695
Inducible T-cell costimulator.
    
 0.645
N300_10103
Interferon-induced helicase C domain-containing protein 1.
   
 0.588
N300_15474
Protein argonaute-4; Belongs to the argonaute family.
    
 0.569
N300_15475
Protein argonaute-3.
    
 0.569
N300_04950
Growth arrest-specific protein 7.
    
  0.563
N300_07790
Ubiquitin-60S ribosomal protein L40.
    
  0.563
N300_06157
Putative ATP-dependent RNA helicase DHX58.
   
 0.544
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.