STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_01993Thrombospondin-1. (1107 aa)    
Predicted Functional Partners:
N300_00463
Platelet glycoprotein 4; Belongs to the CD36 family.
   
 0.934
N300_15602
Matrix metalloproteinase-9.
   
 0.926
N300_14435
Leukocyte surface antigen CD47.
   
 
 0.916
N300_15300
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.914
N300_06205
Integrin beta.
   
 0.912
N300_06673
Integrin alpha-V; Belongs to the integrin alpha chain family.
   
 0.897
N300_13628
Integrin beta.
   
 0.882
N300_03638
Integrin beta.
   
 0.879
N300_03273
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.876
N300_11096
Thrombospondin-2.
  
 
0.874
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.