STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_12908E3 ubiquitin-protein ligase RNF125. (184 aa)    
Predicted Functional Partners:
N300_05998
GDH/6PGL endoplasmic bifunctional protein.
  
 
 0.930
N300_00715
Citrate synthase; Belongs to the citrate synthase family.
  
 0.929
N300_12748
Putative ATP-dependent RNA helicase DDX58.
    
 0.923
N300_10103
Interferon-induced helicase C domain-containing protein 1.
    
 0.908
N300_01128
Cytochrome b5 reductase 4.
  
 
 0.879
N300_01855
CoA_binding domain-containing protein; Belongs to the succinate/malate CoA ligase alpha subunit family.
  
 0.834
N300_02760
Uncharacterized protein.
  
 0.823
N300_03998
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.793
N300_03999
Poly [ADP-ribose] polymerase.
  
 0.793
N300_05485
Poly [ADP-ribose] polymerase.
  
 0.793
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.