Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N300_00438 | N300_00674 | A0A091IKT5 | A0A091I9C5 | Pseudouridylate synthase 7. | tRNA wybutosine-synthesizing protein 3. | 0.531 |
N300_00438 | N300_01634 | A0A091IKT5 | A0A091IGK2 | Pseudouridylate synthase 7. | tRNA (Guanine(37)-N1)-methyltransferase. | 0.468 |
N300_00438 | N300_02684 | A0A091IKT5 | A0A091I096 | Pseudouridylate synthase 7. | TRMT1-like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | 0.665 |
N300_00438 | N300_04734 | A0A091IKT5 | A0A091I037 | Pseudouridylate synthase 7. | tRNA wybutosine-synthesizing protein 2. | 0.408 |
N300_00438 | N300_06344 | A0A091IKT5 | A0A091ICT1 | Pseudouridylate synthase 7. | Putative tRNA pseudouridine synthase Pus10. | 0.586 |
N300_00438 | N300_15210 | A0A091IKT5 | A0A091IHI0 | Pseudouridylate synthase 7. | tRNA (Uracil(54)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.469 |
N300_00674 | N300_00438 | A0A091I9C5 | A0A091IKT5 | tRNA wybutosine-synthesizing protein 3. | Pseudouridylate synthase 7. | 0.531 |
N300_00674 | N300_01634 | A0A091I9C5 | A0A091IGK2 | tRNA wybutosine-synthesizing protein 3. | tRNA (Guanine(37)-N1)-methyltransferase. | 0.730 |
N300_00674 | N300_02684 | A0A091I9C5 | A0A091I096 | tRNA wybutosine-synthesizing protein 3. | TRMT1-like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | 0.494 |
N300_00674 | N300_04734 | A0A091I9C5 | A0A091I037 | tRNA wybutosine-synthesizing protein 3. | tRNA wybutosine-synthesizing protein 2. | 0.719 |
N300_00674 | N300_06344 | A0A091I9C5 | A0A091ICT1 | tRNA wybutosine-synthesizing protein 3. | Putative tRNA pseudouridine synthase Pus10. | 0.481 |
N300_00674 | N300_06719 | A0A091I9C5 | A0A091I1V0 | tRNA wybutosine-synthesizing protein 3. | tRNA wybutosine-synthesizing protein 5. | 0.512 |
N300_00674 | N300_07844 | A0A091I9C5 | A0A091IFS6 | tRNA wybutosine-synthesizing protein 3. | Lengsin; Belongs to the glutamine synthetase family. | 0.481 |
N300_00674 | N300_08501 | A0A091I9C5 | A0A091HLX4 | tRNA wybutosine-synthesizing protein 3. | rRNA-processing protein UTP23. | 0.457 |
N300_00674 | N300_13480 | A0A091I9C5 | A0A091HPV1 | tRNA wybutosine-synthesizing protein 3. | Leucine carboxyl methyltransferase 2. | 0.550 |
N300_00674 | N300_15210 | A0A091I9C5 | A0A091IHI0 | tRNA wybutosine-synthesizing protein 3. | tRNA (Uracil(54)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.527 |
N300_01634 | N300_00438 | A0A091IGK2 | A0A091IKT5 | tRNA (Guanine(37)-N1)-methyltransferase. | Pseudouridylate synthase 7. | 0.468 |
N300_01634 | N300_00674 | A0A091IGK2 | A0A091I9C5 | tRNA (Guanine(37)-N1)-methyltransferase. | tRNA wybutosine-synthesizing protein 3. | 0.730 |
N300_01634 | N300_02684 | A0A091IGK2 | A0A091I096 | tRNA (Guanine(37)-N1)-methyltransferase. | TRMT1-like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | 0.426 |
N300_01634 | N300_04734 | A0A091IGK2 | A0A091I037 | tRNA (Guanine(37)-N1)-methyltransferase. | tRNA wybutosine-synthesizing protein 2. | 0.532 |
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