N300_14664 protein (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

N300_14664

Uncharacterized protein. (1442 aa)

Predicted Functional Partners:

N300_12483

0.977

N300_14634

0.939

N300_03021

0.939

N300_12497

0.937

N300_13773

0.936

N300_13087

0.921

N300_09236

0.910

N300_03570

0.891

N300_11016

0.882

N300_00828

0.880

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_00828	N300_03570	A0A091HTZ5	A0A091I532	cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.	Serine/threonine-protein kinase 36.	0.680
N300_00828	N300_09236	A0A091HTZ5	A0A091ID11	cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.	Kinesin-like KIF27; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.651
N300_00828	N300_12483	A0A091HTZ5	A0A091HSX3	cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.	Suppressor of fused.	0.809
N300_00828	N300_13773	A0A091HTZ5	A0A091IIE6	cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.	Kinesin-like KIF7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.668
N300_00828	N300_14664	A0A091HTZ5	A0A091IAC3	cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.880
N300_03021	N300_12483	A0A091I1E0	A0A091HSX3	Speckle-type POZ protein-like.	Suppressor of fused.	0.886
N300_03021	N300_14634	A0A091I1E0	A0A091HUK8	Speckle-type POZ protein-like.	Speckle-type POZ protein.	0.827
N300_03021	N300_14664	A0A091I1E0	A0A091IAC3	Speckle-type POZ protein-like.	Uncharacterized protein.	0.939
N300_03570	N300_00828	A0A091I532	A0A091HTZ5	Serine/threonine-protein kinase 36.	cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.	0.680
N300_03570	N300_09236	A0A091I532	A0A091ID11	Serine/threonine-protein kinase 36.	Kinesin-like KIF27; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.927
N300_03570	N300_12483	A0A091I532	A0A091HSX3	Serine/threonine-protein kinase 36.	Suppressor of fused.	0.995
N300_03570	N300_13773	A0A091I532	A0A091IIE6	Serine/threonine-protein kinase 36.	Kinesin-like KIF7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.927
N300_03570	N300_14664	A0A091I532	A0A091IAC3	Serine/threonine-protein kinase 36.	Uncharacterized protein.	0.891
N300_09236	N300_00828	A0A091ID11	A0A091HTZ5	Kinesin-like KIF27; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.	0.651
N300_09236	N300_03570	A0A091ID11	A0A091I532	Kinesin-like KIF27; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Serine/threonine-protein kinase 36.	0.927
N300_09236	N300_11016	A0A091ID11	A0A091I1M5	Kinesin-like KIF27; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.427
N300_09236	N300_12483	A0A091ID11	A0A091HSX3	Kinesin-like KIF27; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Suppressor of fused.	0.892
N300_09236	N300_14664	A0A091ID11	A0A091IAC3	Kinesin-like KIF27; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.910
N300_11016	N300_09236	A0A091I1M5	A0A091ID11	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like KIF27; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.427
N300_11016	N300_12483	A0A091I1M5	A0A091HSX3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Suppressor of fused.	0.681