STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_10207Transmembrane and coiled-coil domains protein 1. (165 aa)    
Predicted Functional Partners:
N300_06222
Coiled-coil domain-containing protein 47.
    
 
 0.923
N300_10777
Phenylalanine--tRNA ligase beta subunit.
 
      0.899
N300_02525
Nicalin.
   
 
 0.899
N300_10500
Protein transport protein Sec61 subunit beta.
   
   0.836
N300_15065
Protein transport protein Sec61 subunit gamma.
   
   0.817
N300_09149
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
    
   0.801
N300_11556
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.801
N300_06100
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
   0.801
N300_06104
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
    
   0.801
N300_12100
60S ribosomal protein L4.
    
   0.801
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.