STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_08863PHD finger protein 21A. (660 aa)    
Predicted Functional Partners:
N300_10844
Lysine-specific histone demethylase 1A.
    
 0.960
N300_11638
annotation not available
    
 0.954
N300_15843
REST corepressor 1.
   
 0.938
N300_11426
REST corepressor 3.
   
 0.883
N300_15441
Histone deacetylase 1.
    
 0.821
N300_10761
Histone deacetylase 2.
    
 0.821
N300_11745
High mobility group protein 20A.
    
 0.817
N300_02380
Transcriptional repressor p66-beta.
    
 0.814
N300_00689
Transcriptional repressor p66-alpha.
    
 0.814
N300_01612
AT-rich interactive domain-containing protein 4A.
    
 0.813
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.