STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_09906Ras-related protein Rab-6A. (185 aa)    
Predicted Functional Partners:
N300_00543
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.955
N300_13947
Protein bicaudal D 1.
    
 0.906
N300_15102
GRIP and coiled-coil domain-containing protein 2.
    
 0.898
N300_06625
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
   
 0.886
N300_13257
Vam6/Vps39-like.
    
 
 0.865
N300_09877
Vacuolar protein sorting-associated protein 52.
    
 0.852
N300_11171
Vacuolar protein sorting-associated protein 53.
    
 0.851
N300_14825
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.834
N300_10279
Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.809
N300_09125
Conserved oligomeric Golgi complex subunit 8.
    
 0.809
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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