STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_12800Sphingosine kinase 1. (182 aa)    
Predicted Functional Partners:
N300_07722
Sphingosine-1-phosphate lyase 1.
   
 0.934
N300_09075
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
    
 0.913
N300_04160
Acid ceramidase.
    
 0.906
N300_10778
Sphingosine-1-phosphate phosphatase 2.
   
 0.904
N300_01649
Sphingosine-1-phosphate phosphatase 1.
   
 0.904
N300_07820
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
    
 0.902
N300_06290
Sphingolipid delta(4)-desaturase DES1.
    
 0.899
N300_11467
Sphingolipid delta(4)-desaturase/C4-hydroxylase DES2.
    
 0.899
N300_12633
3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.886
N300_04582
Ceramide synthase 6.
     
 0.876
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.