STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_12002Plakophilin-4. (1200 aa)    
Predicted Functional Partners:
N300_09956
Macrophage-stimulating protein receptor.
   
 0.854
N300_13686
Hepatocyte growth factor receptor.
   
 0.854
N300_01502
Catenin beta-1.
    
 0.798
N300_06147
Junction plakoglobin.
   
 0.791
N300_12916
Cadherin-2; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.785
N300_07670
Catenin alpha-2.
   
 0.771
N300_07685
Catenin alpha-3.
   
 0.771
N300_15920
Catenin alpha-1.
   
 0.771
N300_03396
Cadherin-5; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.767
N300_08239
14-3-3 protein eta; Belongs to the 14-3-3 family.
   
   0.743
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.