STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_15125Histidine--tRNA ligase, cytoplasmic. (390 aa)    
Predicted Functional Partners:
N300_01982
Eukaryotic translation initiation factor 2 subunit 1.
   
 0.967
N300_03104
Eukaryotic translation initiation factor 2-alpha kinase 1.
 
   
 0.930
N300_10211
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.917
N300_15419
Tyrosine--tRNA ligase.
  
 
 0.868
N300_05068
Regulatory-associated protein of mTOR.
    
 0.828
N300_09103
Lysine--tRNA ligase.
  
 
 0.796
N300_08273
Translational activator GCN1.
   
 
 0.776
N300_14204
Target of rapamycin complex subunit lst8.
     
 0.773
N300_12888
DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family.
    
 0.761
N300_06927
Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family.
    
 0.761
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.