STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_12025Homeobox protein NANOG. (310 aa)    
Predicted Functional Partners:
N300_09332
POU domain protein.
   
 0.901
N300_06164
Signal transducer and activator of transcription.
     
 0.845
N300_01954
CD44 antigen.
     
 0.838
N300_07456
Ribonuclease 3.
     
 0.773
N300_05004
Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.
    
  0.772
N300_15267
Sal-like 3.
   
 0.730
N300_03854
Sal-like 1.
   
 0.730
N300_13412
Transcription factor SOX-2.
    
 0.688
N300_15236
Transcription factor SOX-3.
    
 0.688
N300_03928
Nuclear receptor subfamily 0 group B member 1.
   
 
 0.685
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.