Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MED8 | N300_07359 | A0A091HRM9 | A0A091I862 | Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 28. | 0.991 |
MED8 | N300_15204 | A0A091HRM9 | A0A091IHH5 | Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Protein p13 MTCP-1. | 0.426 |
N300_00639 | N300_12353 | A0A091HMF0 | A0A091HI03 | Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Tyrosine-protein kinase transmembrane receptor ROR2; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.854 |
N300_00639 | N300_13758 | A0A091HMF0 | A0A091HU52 | Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Tyrosine-protein kinase receptor. | 0.532 |
N300_00639 | N300_15204 | A0A091HMF0 | A0A091IHH5 | Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Protein p13 MTCP-1. | 0.403 |
N300_05384 | N300_15204 | A0A091HL07 | A0A091IHH5 | Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Protein p13 MTCP-1. | 0.412 |
N300_06972 | N300_11597 | A0A091HYH3 | A0A091HSE8 | RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily. | RAC-alpha serine/threonine-protein kinase; Belongs to the protein kinase superfamily. | 0.754 |
N300_06972 | N300_15204 | A0A091HYH3 | A0A091IHH5 | RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily. | Protein p13 MTCP-1. | 0.787 |
N300_06972 | N300_15503 | A0A091HYH3 | A0A091IAD4 | RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily. | RAC-beta serine/threonine-protein kinase; Belongs to the protein kinase superfamily. | 0.755 |
N300_07359 | MED8 | A0A091I862 | A0A091HRM9 | Mediator of RNA polymerase II transcription subunit 28. | Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.991 |
N300_07359 | N300_15204 | A0A091I862 | A0A091IHH5 | Mediator of RNA polymerase II transcription subunit 28. | Protein p13 MTCP-1. | 0.412 |
N300_11597 | N300_06972 | A0A091HSE8 | A0A091HYH3 | RAC-alpha serine/threonine-protein kinase; Belongs to the protein kinase superfamily. | RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily. | 0.754 |
N300_11597 | N300_15204 | A0A091HSE8 | A0A091IHH5 | RAC-alpha serine/threonine-protein kinase; Belongs to the protein kinase superfamily. | Protein p13 MTCP-1. | 0.787 |
N300_12353 | N300_00639 | A0A091HI03 | A0A091HMF0 | Tyrosine-protein kinase transmembrane receptor ROR2; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.854 |
N300_12353 | N300_13758 | A0A091HI03 | A0A091HU52 | Tyrosine-protein kinase transmembrane receptor ROR2; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Tyrosine-protein kinase receptor. | 0.505 |
N300_12353 | N300_15204 | A0A091HI03 | A0A091IHH5 | Tyrosine-protein kinase transmembrane receptor ROR2; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Protein p13 MTCP-1. | 0.403 |
N300_12704 | N300_15204 | A0A091I2K2 | A0A091IHH5 | Muscle, skeletal receptor tyrosine protein kinase. | Protein p13 MTCP-1. | 0.403 |
N300_13758 | N300_00639 | A0A091HU52 | A0A091HMF0 | Tyrosine-protein kinase receptor. | Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.532 |
N300_13758 | N300_12353 | A0A091HU52 | A0A091HI03 | Tyrosine-protein kinase receptor. | Tyrosine-protein kinase transmembrane receptor ROR2; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.505 |
N300_13758 | N300_15204 | A0A091HU52 | A0A091IHH5 | Tyrosine-protein kinase receptor. | Protein p13 MTCP-1. | 0.403 |
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