Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N300_00616 | N300_01502 | A0A091HMC6 | A0A091HZ16 | Histone H2A deubiquitinase MYSM1. | Catenin beta-1. | 0.561 |
N300_00616 | N300_01639 | A0A091HMC6 | A0A091IGK6 | Histone H2A deubiquitinase MYSM1. | Hypoxia-inducible factor 1-alpha. | 0.528 |
N300_00616 | N300_06682 | A0A091HMC6 | A0A091I522 | Histone H2A deubiquitinase MYSM1. | Small ubiquitin-related modifier. | 0.638 |
N300_00616 | N300_06809 | A0A091HMC6 | A0A091II44 | Histone H2A deubiquitinase MYSM1. | CREB-binding protein. | 0.978 |
N300_00616 | N300_09526 | A0A091HMC6 | A0A091HTQ2 | Histone H2A deubiquitinase MYSM1. | Transcription factor Sp1. | 0.469 |
N300_00616 | N300_11387 | A0A091HMC6 | A0A091I336 | Histone H2A deubiquitinase MYSM1. | Endothelial PAS domain-containing protein 1. | 0.528 |
N300_00616 | PPARG | A0A091HMC6 | A0A091HGU1 | Histone H2A deubiquitinase MYSM1. | Peroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...] | 0.560 |
N300_01502 | N300_00616 | A0A091HZ16 | A0A091HMC6 | Catenin beta-1. | Histone H2A deubiquitinase MYSM1. | 0.561 |
N300_01502 | N300_01639 | A0A091HZ16 | A0A091IGK6 | Catenin beta-1. | Hypoxia-inducible factor 1-alpha. | 0.751 |
N300_01502 | N300_06164 | A0A091HZ16 | A0A091HNR2 | Catenin beta-1. | Signal transducer and activator of transcription. | 0.498 |
N300_01502 | N300_06809 | A0A091HZ16 | A0A091II44 | Catenin beta-1. | CREB-binding protein. | 0.985 |
N300_01502 | N300_09520 | A0A091HZ16 | A0A091HTP8 | Catenin beta-1. | Cyclic AMP-dependent transcription factor ATF-1. | 0.588 |
N300_01502 | N300_09526 | A0A091HZ16 | A0A091HTQ2 | Catenin beta-1. | Transcription factor Sp1. | 0.466 |
N300_01502 | N300_11387 | A0A091HZ16 | A0A091I336 | Catenin beta-1. | Endothelial PAS domain-containing protein 1. | 0.614 |
N300_01502 | N300_14824 | A0A091HZ16 | A0A091HRP3 | Catenin beta-1. | Forkhead box protein O1. | 0.722 |
N300_01502 | PPARG | A0A091HZ16 | A0A091HGU1 | Catenin beta-1. | Peroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...] | 0.781 |
N300_01639 | N300_00616 | A0A091IGK6 | A0A091HMC6 | Hypoxia-inducible factor 1-alpha. | Histone H2A deubiquitinase MYSM1. | 0.528 |
N300_01639 | N300_01502 | A0A091IGK6 | A0A091HZ16 | Hypoxia-inducible factor 1-alpha. | Catenin beta-1. | 0.751 |
N300_01639 | N300_06164 | A0A091IGK6 | A0A091HNR2 | Hypoxia-inducible factor 1-alpha. | Signal transducer and activator of transcription. | 0.834 |
N300_01639 | N300_06682 | A0A091IGK6 | A0A091I522 | Hypoxia-inducible factor 1-alpha. | Small ubiquitin-related modifier. | 0.513 |
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