STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_13727DNA repair protein XRCC4. (250 aa)    
Predicted Functional Partners:
N300_09973
Nitrogen permease regulator 2-like.
   
 0.886
N300_14010
WD repeat-containing protein 24.
    
 0.875
N300_08241
DEP domain-containing protein 5.
    
 0.872
N300_08889
WD repeat-containing protein 59.
    
 0.872
N300_09782
Signal peptidase complex subunit 2.
   
 0.868
N300_09987
Signal peptidase complex subunit 1.
   
 0.858
N300_04837
Signal peptidase complex subunit 3.
    
 0.854
N300_05747
DNA ligase.
    
 0.824
N300_13174
X-ray repair cross-complementing protein 5.
     
 0.770
N300_03595
X-ray repair cross-complementing protein 5.
     
 0.737
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.