STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_10143Collagen alpha-3(IV) chain. (1634 aa)    
Predicted Functional Partners:
N300_13628
Integrin beta.
    
 0.664
N300_06673
Integrin alpha-V; Belongs to the integrin alpha chain family.
    
 0.663
N300_04552
Integrin alpha-6; Belongs to the integrin alpha chain family.
    
 0.658
N300_05489
Integrin alpha-1; Belongs to the integrin alpha chain family.
    
 0.656
N300_06205
Integrin beta.
    
 0.650
N300_04788
Integrin alpha-9; Belongs to the integrin alpha chain family.
    
 0.647
N300_08677
Integrin alpha-4; Belongs to the integrin alpha chain family.
    
 0.644
N300_01035
Integrin beta.
    
  0.643
N300_03638
Integrin beta.
    
 0.643
N300_05567
Integrin alpha-11; Belongs to the integrin alpha chain family.
    
 0.629
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.