STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_05984Tumor necrosis factor receptor superfamily member 4. (127 aa)    
Predicted Functional Partners:
N300_08695
Inducible T-cell costimulator.
   
  
 0.550
N300_14138
T-cell surface glycoprotein CD4.
    
 
 0.547
N300_08694
Cytotoxic T-lymphocyte protein 4.
   
  
 0.542
N300_09338
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 
 0.539
N300_08764
TNF receptor-associated factor 2.
   
 
 0.539
N300_14779
T-lymphocyte activation antigen CD80.
      
 0.535
N300_13285
T-lymphocyte activation antigen CD86.
      
 0.533
N300_11427
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 
 0.533
N300_15599
Tumor necrosis factor receptor superfamily member 5.
   
  
0.512
N300_04746
CD40 ligand; Belongs to the tumor necrosis factor family.
      
 0.495
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.