STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_08150Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (160 aa)    
Predicted Functional Partners:
N300_03879
Vacuolar protein sorting-associated protein 35.
   
 0.980
N300_07704
Vacuolar protein sorting-associated protein 26A.
   
 0.937
N300_04854
Vacuolar protein sorting-associated protein 26B.
   
 0.937
N300_10533
TBC1 domain family member 5.
    
 
 0.909
N300_02265
Sorting nexin-2.
   
 0.899
N300_03987
Sorting nexin-1.
   
 0.899
N300_10284
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
  
  
 
0.883
N300_02731
Inosine triphosphate pyrophosphatase.
  
  
 0.852
N300_03355
Ankyrin repeat domain-containing protein 27.
   
 
 0.786
N300_07012
Sorting nexin-3.
   
 0.781
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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