STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_08382Zinc finger protein 512. (529 aa)    
Predicted Functional Partners:
N300_09389
General transcription factor 3C polypeptide 4.
    
 0.866
N300_07023
Adenylate kinase 9.
    
  0.814
N300_07022
Adenylate kinase 9.
    
  0.814
N300_08822
General transcription factor 3C polypeptide 5.
   
 0.810
N300_07033
General transcription factor 3C polypeptide 6.
    
 0.759
N300_13395
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
    
 0.686
N300_10910
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.685
N300_11494
TATA-box-binding protein.
   
 0.662
N300_11823
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.655
N300_12751
Transcription factor TFIIIB component B.
    
 0.637
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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