STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_09763Vacuolar protein sorting-associated protein VTA1. (275 aa)    
Predicted Functional Partners:
N300_02761
Charged multivesicular body protein 5.
   
 0.998
N300_09146
Charged multivesicular body protein 1a.
    
 0.984
N300_04708
Charged multivesicular body protein 1b.
    
 0.984
N300_09113
IST1.
   
 
 0.964
N300_01591
GTP cyclohydrolase 1.
   
   0.957
N300_10458
Pre-mRNA-splicing factor SPF27.
   
   0.954
N300_09128
Vacuolar protein sorting-associated protein 4A.
   
 0.939
N300_09127
Vacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family.
   
 0.939
N300_12632
Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.
   
 0.939
N300_12631
Vacuolar protein sorting-associated protein 4B.
   
 0.939
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.