STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_02650E3 ubiquitin-protein ligase RFWD2. (606 aa)    
Predicted Functional Partners:
N300_13761
DET1.
    
 0.978
N300_13600
DNA damage-binding protein 1.
    
 0.923
N300_12579
DNA damage-binding protein 2.
    
 0.906
N300_05523
DNA excision repair protein ERCC-8.
    
  0.841
N300_11574
RING-box protein 1.
    
 0.823
N300_15878
ETS translocation variant 5.
    
 
 0.807
N300_04675
Cullin-4B; Belongs to the cullin family.
    
 0.799
N300_15077
Cullin-4A; Belongs to the cullin family.
    
 0.799
N300_15485
Serine/threonine-protein kinase 40.
    
 
 0.781
N300_00692
DET1-and DDB1-associated protein 1.
    
  0.760
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.