STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_09469Beta-1,3-glucosyltransferase. (449 aa)    
Predicted Functional Partners:
N300_07984
Negative elongation factor B.
    
 0.804
N300_10967
Pre-mRNA-splicing factor ISY1.
 
      0.754
N300_13395
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
    
  0.753
N300_06574
Spondin-1.
     
 0.740
N300_15731
Negative elongation factor D.
    
 0.726
N300_13408
Uncharacterized protein.
    
 0.726
N300_14931
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.722
N300_15502
DNA-directed RNA polymerase II subunit RPB9.
    
  0.720
N300_02494
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
  0.718
N300_03888
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
  0.718
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.