STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_14385RNA-binding protein with multiple splicing. (150 aa)    
Predicted Functional Partners:
N300_12742
Nuclear cap-binding protein subunit 1.
    
 0.697
N300_03734
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.696
N300_06667
Small nuclear ribonucleoprotein F.
   
 0.682
N300_08229
Small nuclear ribonucleoprotein Sm D3.
   
 0.681
N300_12791
Serine/arginine-rich splicing factor 2.
    
 0.680
N300_09472
Small nuclear ribonucleoprotein G.
   
 0.675
N300_09186
40S ribosomal protein S6.
    
 0.667
N300_13402
Eukaryotic initiation factor 4A-II; Belongs to the DEAD box helicase family.
    
 0.659
N300_10917
Splicing factor 3B subunit 4.
    
 0.658
N300_06067
Eukaryotic translation initiation factor 2 subunit 3.
   
 0.657
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.