STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_06689Pleckstrin homology domain-containing family M member 3. (759 aa)    
Predicted Functional Partners:
N300_07520
WD repeat-and FYVE domain-containing protein 4.
   
 
  0.807
N300_07522
WD repeat-and FYVE domain-containing protein 4.
   
 
  0.807
N300_15358
Pleckstrin homology domain-containing family M member 1.
 
   
  0.724
N300_06691
Cyclin-Y-like 1-B; Belongs to the cyclin family.
      
 0.509
N300_14554
Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.
    
 
 0.472
N300_06181
Beclin-1.
    
 
 0.469
N300_09137
Differentially expressed in FDCP 8.
    
 
0.466
N300_13552
Ras-related protein Rab-4A.
    
  0.455
N300_10919
Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.448
N300_07293
Intersectin-1.
    
   0.448
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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