STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_10843CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (427 aa)    
Predicted Functional Partners:
N300_05942
Protein-S-isoprenylcysteine O-methyltransferase.
   
 0.925
N300_02291
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
     
 0.915
N300_06726
Uncharacterized protein; Belongs to the GroES chaperonin family.
  
  
 0.576
N300_10844
Lysine-specific histone demethylase 1A.
      0.573
N300_13050
Uncharacterized protein; Belongs to the GrpE family.
  
  
 0.551
N300_02072
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
  
 0.551
N300_00499
Protein transport protein Sec61 subunit alpha isoform 2.
  
 
 0.540
N300_10068
Protein transport protein Sec61 subunit alpha isoform 1.
  
 
 0.540
N300_10211
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.531
N300_06596
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
  0.529
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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