STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_07129Complement C1q tumor necrosis factor-related protein 3. (246 aa)    
Predicted Functional Partners:
N300_10905
Histone-lysine N-methyltransferase SETDB1.
    
  0.553
N300_08493
Collectin-10.
  
 
   0.549
N300_12392
Collagen alpha-2(VI) chain.
  
0.527
N300_09138
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.493
N300_05384
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.484
N300_12391
Collagen alpha-1(VI) chain.
  
 
0.481
N300_08892
Ig-like domain-containing protein.
    
  0.481
N300_02908
Tumor necrosis factor-inducible 6.
    
 0.480
N300_00377
Protection of telomeres protein 1.
    
  0.479
N300_09403
Transcription initiation factor TFIID subunit 12.
    
  0.479
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.