STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_07134Threonine--tRNA ligase, cytoplasmic. (673 aa)    
Predicted Functional Partners:
N300_14465
Putative threonine--tRNA ligase 2, cytoplasmic.
  
 
 
0.897
N300_13371
Eukaryotic translation initiation factor 4E type 2; Belongs to the eukaryotic initiation factor 4E family.
   
 
 0.853
N300_15419
Tyrosine--tRNA ligase.
  
 
 0.850
N300_06257
Tr-type G domain-containing protein.
  
 0.810
N300_10994
Leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.809
N300_06519
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.800
N300_12872
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.782
N300_10554
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.764
N300_02648
Uncharacterized protein.
   
 
 0.748
N300_02092
Uncharacterized protein.
  
 
 0.745
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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