STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_08027Rab-like 6. (771 aa)    
Predicted Functional Partners:
N300_00543
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.911
N300_12909
Trafficking protein particle complex subunit 8.
    
 0.908
N300_01398
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.898
N300_02743
Trafficking protein particle complex subunit 5.
    
 0.892
N300_05678
Trafficking protein particle complex subunit 6B.
    
 0.892
N300_02358
Trafficking protein particle complex subunit 2.
    
 0.890
N300_02130
General vesicular transport factor p115.
   
 0.856
N300_01871
Autophagy-related protein 16-1.
    
 0.850
N300_00676
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.823
N300_15647
TBC1 domain family member 20.
    
 0.807
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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