STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_15822Putative ATP-dependent RNA helicase TDRD9. (1177 aa)    
Predicted Functional Partners:
N300_10376
Intersectin-2.
    
  0.990
N300_13382
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.835
N300_11725
Piwi-like 2.
   
 0.832
N300_08217
Piwi-like 1; Belongs to the argonaute family.
   
 0.831
N300_07293
Intersectin-1.
    
  0.824
N300_11293
U3 small nucleolar RNA-associated protein 14 B.
   
 0.785
N300_04876
U3 small nucleolar RNA-associated protein 18.
   
 0.755
N300_12469
Protein RRP5.
  
 0.752
N300_02110
Something about silencing protein 10.
   
 0.747
N300_10347
Tuftelin-interacting protein 11.
   
 0.736
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.