STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_02917SAP domain-containing ribonucleoprotein. (140 aa)    
Predicted Functional Partners:
N300_05104
THO complex subunit 4.
   
 0.951
N300_13155
Polymerase delta-interacting protein 3.
   
 0.935
N300_12944
THO complex subunit 1.
    
 0.924
N300_14423
Chromatin target of PRMT1 protein.
   
 0.913
N300_02610
Uncharacterized protein C12orf50.
    
 0.888
N300_04671
THO complex subunit 2.
   
 0.873
N300_04490
THO complex subunit 7.
   
 0.869
N300_14867
THO complex subunit 5.
    
 0.858
N300_05364
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 0.825
N300_13351
UAP56-interacting factor.
    
 0.816
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.