STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_07758Ras-related protein Rab-8A. (161 aa)    
Predicted Functional Partners:
N300_00543
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.894
N300_12725
Protein C9orf72.
    
 0.869
N300_14738
Rab-3A-interacting protein.
    
 0.866
N300_08760
Ras-related protein Rab-1A.
  
 
0.859
N300_09017
Smith-Magenis syndrome chromosomal region candidate 8.
    
 0.859
N300_10598
Sequestosome-1.
    
 0.854
N300_04333
WD repeat-containing protein 41.
     
 0.840
N300_06332
Exocyst complex component 6B.
    
 0.838
N300_15024
Ras-related protein Rab-8B.
  
  
 
0.828
N300_02444
Guanine nucleotide exchange factor for Rab-3A.
    
 0.824
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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