N300_07763 protein (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

N300_07763

KN motif and ankyrin repeat domain-containing protein 3. (356 aa)

Predicted Functional Partners:

N300_04364

0.900

N300_09908

0.701

KATNAL2

0.607

N300_09521

0.606

N300_06936

0.606

N300_10261

0.560

N300_03466

0.540

N300_14201

0.533

N300_15894

0.531

N300_13402

0.527

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KATNAL2	N300_04364	A0A091HSD3	A0A091J9B1	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	KN motif and ankyrin repeat domain-containing protein 1.	0.607
KATNAL2	N300_06936	A0A091HSD3	A0A091I0M1	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Baculoviral IAP repeat-containing protein 6.	0.796
KATNAL2	N300_07763	A0A091HSD3	A0A091J3K3	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	KN motif and ankyrin repeat domain-containing protein 3.	0.607
KATNAL2	N300_09521	A0A091HSD3	A0A091HWY2	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.418
KATNAL2	N300_09908	A0A091HSD3	A0A091J440	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Chromosome-associated kinesin KIF4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.417
KATNAL2	N300_14201	A0A091HSD3	A0A091HK34	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	E3 ubiquitin-protein ligase TRAF7.	0.553
KATNAL2	N300_15894	A0A091HSD3	A0A091IFQ2	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	UBX domain-containing protein 7.	0.999
N300_03466	N300_04364	A0A091HZY3	A0A091J9B1	Rab-like 5.	KN motif and ankyrin repeat domain-containing protein 1.	0.540
N300_03466	N300_07763	A0A091HZY3	A0A091J3K3	Rab-like 5.	KN motif and ankyrin repeat domain-containing protein 3.	0.540
N300_03466	N300_10261	A0A091HZY3	A0A091I7N8	Rab-like 5.	Intraflagellar transport protein 81.	0.991
N300_04364	KATNAL2	A0A091J9B1	A0A091HSD3	KN motif and ankyrin repeat domain-containing protein 1.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.607
N300_04364	N300_03466	A0A091J9B1	A0A091HZY3	KN motif and ankyrin repeat domain-containing protein 1.	Rab-like 5.	0.540
N300_04364	N300_06936	A0A091J9B1	A0A091I0M1	KN motif and ankyrin repeat domain-containing protein 1.	Baculoviral IAP repeat-containing protein 6.	0.606
N300_04364	N300_07763	A0A091J9B1	A0A091J3K3	KN motif and ankyrin repeat domain-containing protein 1.	KN motif and ankyrin repeat domain-containing protein 3.	0.900
N300_04364	N300_09521	A0A091J9B1	A0A091HWY2	KN motif and ankyrin repeat domain-containing protein 1.	Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.606
N300_04364	N300_09908	A0A091J9B1	A0A091J440	KN motif and ankyrin repeat domain-containing protein 1.	Chromosome-associated kinesin KIF4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.701
N300_04364	N300_10261	A0A091J9B1	A0A091I7N8	KN motif and ankyrin repeat domain-containing protein 1.	Intraflagellar transport protein 81.	0.560
N300_04364	N300_13402	A0A091J9B1	A0A091HZE2	KN motif and ankyrin repeat domain-containing protein 1.	Eukaryotic initiation factor 4A-II; Belongs to the DEAD box helicase family.	0.527
N300_04364	N300_14201	A0A091J9B1	A0A091HK34	KN motif and ankyrin repeat domain-containing protein 1.	E3 ubiquitin-protein ligase TRAF7.	0.533
N300_04364	N300_15894	A0A091J9B1	A0A091IFQ2	KN motif and ankyrin repeat domain-containing protein 1.	UBX domain-containing protein 7.	0.531