STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_05835Protein lin-28 A. (170 aa)    
Predicted Functional Partners:
N300_09332
POU domain protein.
   
 0.731
N300_04011
Terminal uridylyltransferase 4.
   
 0.705
N300_08516
Terminal uridylyltransferase 7.
   
 0.666
N300_06667
Small nuclear ribonucleoprotein F.
    
  0.663
N300_09472
Small nuclear ribonucleoprotein G.
    
  0.660
N300_08229
Small nuclear ribonucleoprotein Sm D3.
   
 0.659
N300_15596
Small nuclear ribonucleoprotein-associated protein B.
    
  0.636
N300_03734
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.619
N300_12666
Symplekin.
    
 0.617
N300_10243
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
  
 0.610
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.