STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_07573Ras-related protein Rab-5A. (215 aa)    
Predicted Functional Partners:
N300_14569
Rab5 GDP/GTP exchange factor.
   
 0.998
N300_14554
Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.
    
 0.950
N300_04415
Rabenosyn-5.
   
 0.950
N300_14814
Early endosome antigen 1.
    
 0.945
N300_00543
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.942
N300_07221
Rab GTPase-binding effector protein 1.
    
 0.928
N300_08627
DCC-interacting protein 13-beta.
   
 
 0.917
N300_10045
DCC-interacting protein 13-alpha.
    
 
 0.917
N300_09343
GTPase-activating protein and VPS9 domain-containing protein 1.
    
 0.874
N300_15387
Alsin.
    
 0.871
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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