Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N300_00543 | N300_07573 | A0A091HVR2 | A0A091JA65 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Ras-related protein Rab-5A. | 0.942 |
N300_00543 | N300_09343 | A0A091HVR2 | A0A091HT41 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | GTPase-activating protein and VPS9 domain-containing protein 1. | 0.653 |
N300_00543 | N300_14569 | A0A091HVR2 | A0A091HQB7 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Rab5 GDP/GTP exchange factor. | 0.986 |
N300_00543 | N300_15387 | A0A091HVR2 | A0A091HKX0 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Alsin. | 0.641 |
N300_04415 | N300_07221 | A0A091IH63 | A0A091J5N2 | Rabenosyn-5. | Rab GTPase-binding effector protein 1. | 0.497 |
N300_04415 | N300_07573 | A0A091IH63 | A0A091JA65 | Rabenosyn-5. | Ras-related protein Rab-5A. | 0.950 |
N300_04415 | N300_08627 | A0A091IH63 | A0A091HJS7 | Rabenosyn-5. | DCC-interacting protein 13-beta. | 0.564 |
N300_04415 | N300_10045 | A0A091IH63 | A0A091I9P3 | Rabenosyn-5. | DCC-interacting protein 13-alpha. | 0.564 |
N300_04415 | N300_14554 | A0A091IH63 | A0A091I7U4 | Rabenosyn-5. | Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family. | 0.732 |
N300_04415 | N300_14569 | A0A091IH63 | A0A091HQB7 | Rabenosyn-5. | Rab5 GDP/GTP exchange factor. | 0.564 |
N300_07221 | N300_04415 | A0A091J5N2 | A0A091IH63 | Rab GTPase-binding effector protein 1. | Rabenosyn-5. | 0.497 |
N300_07221 | N300_07573 | A0A091J5N2 | A0A091JA65 | Rab GTPase-binding effector protein 1. | Ras-related protein Rab-5A. | 0.928 |
N300_07221 | N300_09343 | A0A091J5N2 | A0A091HT41 | Rab GTPase-binding effector protein 1. | GTPase-activating protein and VPS9 domain-containing protein 1. | 0.939 |
N300_07221 | N300_14569 | A0A091J5N2 | A0A091HQB7 | Rab GTPase-binding effector protein 1. | Rab5 GDP/GTP exchange factor. | 0.999 |
N300_07221 | N300_14814 | A0A091J5N2 | A0A091I9T7 | Rab GTPase-binding effector protein 1. | Early endosome antigen 1. | 0.673 |
N300_07573 | N300_00543 | A0A091JA65 | A0A091HVR2 | Ras-related protein Rab-5A. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.942 |
N300_07573 | N300_04415 | A0A091JA65 | A0A091IH63 | Ras-related protein Rab-5A. | Rabenosyn-5. | 0.950 |
N300_07573 | N300_07221 | A0A091JA65 | A0A091J5N2 | Ras-related protein Rab-5A. | Rab GTPase-binding effector protein 1. | 0.928 |
N300_07573 | N300_08627 | A0A091JA65 | A0A091HJS7 | Ras-related protein Rab-5A. | DCC-interacting protein 13-beta. | 0.917 |
N300_07573 | N300_09343 | A0A091JA65 | A0A091HT41 | Ras-related protein Rab-5A. | GTPase-activating protein and VPS9 domain-containing protein 1. | 0.874 |
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