STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_07611CCR4-NOT transcription complex subunit 10. (738 aa)    
Predicted Functional Partners:
N300_03169
CCR4-NOT transcription complex subunit 11.
    
 0.998
N300_14740
CCR4-NOT transcription complex subunit 2.
   
 0.972
N300_03575
Cell differentiation protein RCD1.
    
 0.967
N300_04150
CCR4-NOT transcription complex subunit 7.
    
 0.954
N300_06623
CCR4-NOT transcription complex subunit 4.
     
 0.943
N300_10556
CCR4-NOT transcription complex subunit 8.
    
 0.927
N300_10609
CCR4-NOT transcription complex subunit 6.
    
 0.823
N300_02093
CCR4-NOT transcription complex subunit 6-like.
    
 0.823
N300_10632
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
    
 0.813
N300_13181
Protein Tob2.
    
 0.756
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.