STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA72226.1Hypothetical protein. (161 aa)    
Predicted Functional Partners:
SKA72220.1
Hypothetical protein.
       0.798
SKA72223.1
Protein of unknown function.
       0.798
SKA72228.1
Phage tail protein (Tail_P2_I).
       0.798
SKA72230.1
Phage-related baseplate assembly protein.
       0.789
SKA72233.1
Phage baseplate assembly protein W.
       0.789
SKA72204.1
Hypothetical protein.
       0.780
SKA72208.1
Hypothetical protein.
       0.780
SKA72212.1
Hypothetical protein.
       0.773
SKA72214.1
Hypothetical protein.
       0.773
SKA72217.1
Hypothetical protein.
       0.773
Your Current Organism:
Thiothrix eikelboomii
NCBI taxonomy Id: 92487
Other names: ATCC 49788, Eikelboom type 021N, T. eikelboomii, Thiothrix sp. AP3, filamentous bacterium COM-A, filamentous bacterium KR-A, filamentous bacterium T1-4, filamentous bacterium T2-1, strain AP3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.