STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA76070.1Peroxiredoxin family protein. (154 aa)    
Predicted Functional Partners:
SKA68807.1
tRNA 2-thiouridine synthesizing protein A; Belongs to the sulfur carrier protein TusA family.
 
 
 0.903
SKA68746.1
TusA-related sulfurtransferase; Belongs to the sulfur carrier protein TusA family.
 
 
 0.870
SKA76066.1
Rhodanese-related sulfurtransferase.
 
    0.660
SKA85374.1
tRNA 2-thiouridine synthesizing protein D.
 
  
  0.589
iscS
Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
    
  0.540
SKA76082.1
NADPH-dependent FMN reductase.
       0.512
SKA78657.1
Hypothetical protein.
  
     0.511
SKA85416.1
NADPH-dependent glutamate synthase beta chain.
  
   
 0.477
SKA76088.1
Hypothetical protein.
       0.461
SKA95370.1
Sulfide:quinone oxidoreductase.
 
     0.450
Your Current Organism:
Thiothrix eikelboomii
NCBI taxonomy Id: 92487
Other names: ATCC 49788, Eikelboom type 021N, T. eikelboomii, Thiothrix sp. AP3, filamentous bacterium COM-A, filamentous bacterium KR-A, filamentous bacterium T1-4, filamentous bacterium T2-1, strain AP3
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.