STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA76852.1Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (364 aa)    
Predicted Functional Partners:
SKA76816.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.981
SKA76821.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.977
SKA76801.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-).
 
  0.975
SKA76808.1
Predicted small integral membrane protein.
 
     0.950
SKA76846.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
    
0.846
SKA75627.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.704
SKA95280.1
Sorbitol/mannitol transport system permease protein.
 
 0.697
SKA76863.1
Transcriptional regulator, DeoR family.
 
     0.683
SKA94659.1
Trehalose/maltose transport system permease protein.
  0.682
SKA76857.1
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.674
Your Current Organism:
Thiothrix eikelboomii
NCBI taxonomy Id: 92487
Other names: ATCC 49788, Eikelboom type 021N, T. eikelboomii, Thiothrix sp. AP3, filamentous bacterium COM-A, filamentous bacterium KR-A, filamentous bacterium T1-4, filamentous bacterium T2-1, strain AP3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.