STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA79597.1Glyoxylase, beta-lactamase superfamily II. (245 aa)    
Predicted Functional Partners:
SKA79609.1
Rhodanese-related sulfurtransferase.
 
 
 0.919
SKA94971.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 
  0.813
SKA79624.1
Predicted arabinose efflux permease, MFS family.
 
     0.803
SKA93022.1
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
     
 0.799
SKA69844.1
Rhodanese-related sulfurtransferase.
 
 
  0.785
SKA79615.1
DsrE/DsrF-like family protein.
       0.749
SKA69438.1
Rhodanese-related sulfurtransferase.
  
 0.740
SKA85029.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
  
  0.572
SKA70161.1
Glyoxylase, beta-lactamase superfamily II.
  
  
 
0.558
SKA83892.1
Acyl transferase domain-containing protein.
   
 
 0.516
Your Current Organism:
Thiothrix eikelboomii
NCBI taxonomy Id: 92487
Other names: ATCC 49788, Eikelboom type 021N, T. eikelboomii, Thiothrix sp. AP3, filamentous bacterium COM-A, filamentous bacterium KR-A, filamentous bacterium T1-4, filamentous bacterium T2-1, strain AP3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.