STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA79813.1Methyltransferase domain-containing protein. (336 aa)    
Predicted Functional Partners:
SKA79817.1
Lauroyl/myristoyl acyltransferase.
 
     0.888
SKA79824.1
Lipopolysaccharide transport system ATP-binding protein.
 
     0.845
SKA79833.1
Lipopolysaccharide transport system permease protein.
 
     0.840
SKA79851.1
Hypothetical protein.
 
     0.771
SKA83900.1
Glycosyltransferase, GT2 family.
  
 0.755
SKA79794.1
Haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.
 
     0.733
SKA79841.1
PPIC-type PPIASE domain-containing protein.
  
   0.713
SKA79804.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.677
SKA83906.1
Glycosyltransferase, GT2 family.
  
 0.633
SKA79779.1
Glycosyl transferase family 2.
 
     0.626
Your Current Organism:
Thiothrix eikelboomii
NCBI taxonomy Id: 92487
Other names: ATCC 49788, Eikelboom type 021N, T. eikelboomii, Thiothrix sp. AP3, filamentous bacterium COM-A, filamentous bacterium KR-A, filamentous bacterium T1-4, filamentous bacterium T2-1, strain AP3
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