STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA85487.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (549 aa)    
Predicted Functional Partners:
SKA85480.1
Peptide/nickel transport system permease protein.
 
 0.991
SKA87144.1
Dipeptide transport system permease protein.
 
 0.985
SKA85476.1
Peptide/nickel transport system permease protein.
 
 
 0.977
SKA93939.1
Peptide/nickel transport system permease protein.
 
 0.977
SKA85470.1
Peptide/nickel transport system substrate-binding protein.
 
 
  0.963
SKA89655.1
Peptide/nickel transport system permease protein.
 
 0.954
SKA93928.1
Peptide/nickel transport system permease protein.
 
 0.904
SKA89661.1
Peptide/nickel transport system permease protein.
 
 0.900
SKA87139.1
Dipeptide transport system permease protein.
 
 0.890
SKA87133.1
Dipeptide transport system substrate-binding protein.
 
 
  0.808
Your Current Organism:
Thiothrix eikelboomii
NCBI taxonomy Id: 92487
Other names: ATCC 49788, Eikelboom type 021N, T. eikelboomii, Thiothrix sp. AP3, filamentous bacterium COM-A, filamentous bacterium KR-A, filamentous bacterium T1-4, filamentous bacterium T2-1, strain AP3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.