STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA87054.1Organic hydroperoxide reductase OsmC/OhrA. (154 aa)    
Predicted Functional Partners:
SKA87061.1
ATP-dependent helicase HrpA.
       0.639
SKA71723.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
    0.478
SKA72520.1
Diguanylate cyclase (GGDEF) domain-containing protein.
   
    0.478
SKA87082.1
Hypothetical protein.
  
    0.476
SKA87091.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
  
    0.434
SKA87076.1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
    0.433
SKA87068.1
Protein of unknown function.
       0.429
SKA87087.1
Hypothetical protein.
       0.429
SKA87097.1
SnoaL-like domain-containing protein.
       0.429
Your Current Organism:
Thiothrix eikelboomii
NCBI taxonomy Id: 92487
Other names: ATCC 49788, Eikelboom type 021N, T. eikelboomii, Thiothrix sp. AP3, filamentous bacterium COM-A, filamentous bacterium KR-A, filamentous bacterium T1-4, filamentous bacterium T2-1, strain AP3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.