STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA48Uncharacterized protein. (125 aa)    
Predicted Functional Partners:
DNASE2
Deoxyribonuclease 2, lysosomal.
      
 0.594
THSD7A
Thrombospondin type 1 domain containing 7A.
      
 0.580
KLHDC8B
Kelch domain containing 8B.
      
 0.532
TOGARAM1
Uncharacterized protein.
      
 0.512
KCNG3
Ion_trans domain-containing protein; Belongs to the potassium channel family.
      
 0.510
TRAPPC6B
Trafficking protein particle complex 6B.
      
 0.506
ZPBP
Zona pellucida binding protein.
   
  
 0.423
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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