STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS11Uncharacterized protein. (326 aa)    
Predicted Functional Partners:
VPS18
Pep3_Vps18 domain-containing protein.
   
 0.999
VPS39
VPS39 subunit of HOPS complex.
   
 0.999
VPS16
Vps16_N domain-containing protein.
    
 0.999
VPS41
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
   
 0.994
TGFBRAP1
Transforming growth factor beta receptor associated protein 1.
   
 0.994
VPS33A
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.987
CCZ1
Uncharacterized protein.
    
 
 0.966
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
    
 
 0.951
K7EH11_ORNAN
Uncharacterized protein.
   
 0.945
K7EBQ2_ORNAN
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.879
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.