STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMC1Laminin subunit gamma 1. (1473 aa)    
Predicted Functional Partners:
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.983
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
   
 0.979
LAMA1-2
Uncharacterized protein.
 
 
 0.979
LAMA2
Uncharacterized protein.
   
0.975
LAMA3
Uncharacterized protein.
   
0.972
NID1
Nidogen 1.
   
 0.954
LAMB3
Laminin N-terminal domain-containing protein.
   
 0.953
LAMA4
LAM_G_DOMAIN domain-containing protein.
 
 
 0.952
ITGA3
Uncharacterized protein.
   
 0.951
DAG1
Dystroglycan 1.
   
 0.945
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.