STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIN9Lin-9 DREAM MuvB core complex component. (542 aa)    
Predicted Functional Partners:
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.991
LIN54
Uncharacterized protein.
   
 0.984
FOXM1
Fork-head domain-containing protein.
    
 0.954
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.919
F6S3R5_ORNAN
Uncharacterized protein.
    
 0.913
F7FD46_ORNAN
Uncharacterized protein.
    
 0.911
K7EDI7_ORNAN
Cmyb_C domain-containing protein.
    
 0.911
F7DE01_ORNAN
E2F_CC-MB domain-containing protein.
    
 0.882
RBL2
RB transcriptional corepressor like 2.
   
 0.873
F7CEY0_ORNAN
Uncharacterized protein.
   
 0.849
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.