STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATOH7Atonal bHLH transcription factor 7. (151 aa)    
Predicted Functional Partners:
VSX1
Uncharacterized protein.
   
  
 0.642
PBLD
Phenazine biosynthesis like protein domain containing.
 
    
 0.628
GDF11
TGF_BETA_2 domain-containing protein.
   
  
 0.583
TCF4
Transcription factor 4.
    
 
 0.572
TCF12
Transcription factor 12.
    
 
 0.572
TCF3
BHLH domain-containing protein.
    
 
 0.572
TCF3-2
Uncharacterized protein.
    
 
 0.572
PAX6
Paired box 6.
      
 0.562
FOXN4
Forkhead box N4.
   
  
 0.530
POU4F2
POU domain protein.
      
 0.487
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.