STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNALI1Dynein axonemal light intermediate chain 1. (269 aa)    
Predicted Functional Partners:
GAS8
Growth arrest specific 8.
  
 
 
 0.770
F7B854_ORNAN
WD_REPEATS_REGION domain-containing protein.
   
  
 0.724
DYNC2LI1
Dynein cytoplasmic 2 light intermediate chain 1.
      
 0.720
BBS5
Bardet-Biedl syndrome 5 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This ciliogenic function is mediated in part by the Rab8 GDP/GTP exchange factor, which localizes to the basal body and contacts the BBSome. Rab8(GTP) enters the primary cilium and promotes extension of the ciliary membrane. Firstly the BBSome associates with the ciliary membrane and binds to RAB3IP/Rabin8, the gua [...]
      
 0.688
F6UIP3_ORNAN
Uncharacterized protein.
    
 
 0.681
ARMC4
Armadillo repeat containing 4.
   
 
 0.678
RSPH1
Radial spoke head component 1.
   
 
 0.662
PIH1D3
PIH1 domain containing 3.
   
  
 0.660
CCDC40
Uncharacterized protein.
   
 
 0.658
ZMYND10
Zinc finger MYND-type containing 10.
   
  
 0.647
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.