STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGFOD12-oxoglutarate and iron dependent oxygenase domain containing 1. (488 aa)    
Predicted Functional Partners:
K7EA93_ORNAN
Cor1 domain-containing protein.
   
 
 0.823
K7EEA4_ORNAN
Cor1 domain-containing protein.
   
 
 0.823
CPOX
Uncharacterized protein.
   
  
 0.656
RPS23
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.617
TSR1
TSR1 ribosome maturation factor.
   
    0.583
CAPRIN1
Cell cycle associated protein 1.
      
 0.567
HERPUD2
HERPUD family member 2.
      
 0.563
OGFOD2
Uncharacterized protein.
      
 0.555
POLR3A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.523
SREBF2
Sterol regulatory element binding transcription factor 2.
   
 
 0.522
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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