STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6ZS30_ORNANUncharacterized protein. (941 aa)    
Predicted Functional Partners:
F6Z0L4_ORNAN
Uncharacterized protein.
 
     0.928
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.625
F6SUK1_ORNAN
Uncharacterized protein.
    
 0.624
SNW1
SNW domain containing 1.
    
 0.615
RANGAP1
Ran GTPase activating protein 1.
   
 0.604
FAM110B
Family with sequence similarity 110 member B.
      
 0.592
NUP155
Nucleoporin 155.
   
 0.588
K7EI21_ORNAN
Uncharacterized protein.
    
 0.587
NUP85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.581
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.562
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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